Archive for July, 2007

  • BioRuby’s Bio::FlatFileIndex compatibility with BioPerl’s Bio::DB::Flat

    Summary: Attached is a diff that allows Bio::FlatFileIndex to access BDB flatfile databases created by BioPerl’s Bio::DB::Flat. I have not changed the way BioRuby creates its databases, so this likely breaks access to BioRuby-created flatfile indices.

    Friday, July 20th, 2007
  • Command-line image rotation based on EXIF data

    Oddly enough, the ImageMagick documentation recommends a third-party utility for this: JHead. Everything suddenly becomes ridiculously easy:
    jhead -autorot *.jpg
    Done! I like it.

    Wednesday, July 4th, 2007